Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010045.1 Corchorus olitorius cultivar O-4 contig10077, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10853

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1354--1385
16
2.0
16
100
0
64
25
12
31
31
1.92
2975--3130
50
3.1
50
100
0
312
26
19
16
38
1.92
3314--3374
28
2.2
28
90
0
95
39
29
11
19
1.87
6523--6593
33
2.2
33
82
5
81
18
18
35
28
1.94
8427--8752
132
2.5
132
83
6
392
35
13
13
37
1.84
9032--9087
24
2.3
24
100
0
112
19
21
39
19
1.93
9096--9515
87
5.0
86
80
7
477
22
13
34
29
1.93
9194--9515
162
2.0
162
89
0
491
22
15
33
28
1.94

Tables:   1

The End!