Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010051.1 Corchorus olitorius cultivar O-4 contig10083, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8646

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
400--894
178
2.8
177
91
3
789
34
16
14
34
1.89
401--952
178
3.1
178
86
5
758
35
16
13
33
1.88
940--1009
36
1.9
36
100
0
140
44
18
11
25
1.83
7951--8222
107
2.6
106
89
2
415
40
8
7
43
1.64
7951--8257
107
2.9
104
85
7
374
41
9
6
42
1.63
8552--8598
16
3.1
15
79
8
51
55
2
0
42
1.12
8589--8623
12
2.8
12
91
8
52
74
2
5
17
1.14

Tables:   1

The End!