Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010052.1 Corchorus olitorius cultivar O-4 contig10084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2840

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
747--809
30
2.1
30
94
5
110
12
4
20
61
1.49
1063--1224
78
2.1
78
95
0
288
50
1
14
34
1.51
1400--1463
10
6.4
10
96
0
92
50
6
0
43
1.27
1400--1463
6
10.7
6
91
0
92
50
6
0
43
1.27
1400--1463
4
16.0
4
93
0
92
50
6
0
43
1.27
1521--1580
22
2.7
22
84
0
84
38
15
10
36
1.80
1591--1667
23
3.5
21
75
10
64
33
20
9
36
1.85
1591--1708
22
5.4
22
72
7
87
29
19
10
40
1.84

Tables:   1

The End!