Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010066.1 Corchorus olitorius cultivar O-4 contig10098, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5811

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--90
21
3.3
21
68
20
59
36
1
10
51
1.46
318--354
2
19.0
2
88
5
58
48
0
2
48
1.15
413--493
22
3.7
22
83
1
110
43
11
6
39
1.65
413--515
43
2.4
44
88
1
145
42
12
6
37
1.70
413--537
65
1.9
64
80
9
146
43
12
6
37
1.69
462--609
22
6.9
21
70
12
79
33
14
8
43
1.76
541--609
20
3.3
20
76
11
68
23
17
10
49
1.77
1920--1948
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!