Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010080.1 Corchorus olitorius cultivar O-4 contig10112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12545

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1884--1977
46
2.0
47
91
6
154
52
24
3
20
1.61
4631--4661
3
10.3
3
92
0
53
61
0
0
38
0.96
7288--7314
2
13.5
2
100
0
54
48
0
0
51
1.00
8120--8150
16
1.9
16
100
0
62
51
0
19
29
1.47
9959--9996
12
3.0
13
88
7
60
57
0
0
42
0.98

Tables:   1

The End!