Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010090.1 Corchorus olitorius cultivar O-4 contig10122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4156

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
113--188
30
2.5
30
95
0
134
27
43
2
26
1.68
137--188
15
3.2
18
65
30
53
25
46
3
25
1.70
191--251
21
2.9
21
95
0
113
21
39
19
19
1.93
324--366
21
2.0
21
95
0
77
34
44
4
16
1.68
1457--1553
31
3.2
29
80
11
81
23
16
15
44
1.86
1481--1569
31
3.0
29
82
14
101
28
14
14
42
1.85
3549--3581
2
17.5
2
87
12
52
51
0
0
48
1.00

Tables:   1

The End!