Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010099.1 Corchorus olitorius cultivar O-4 contig10131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4549

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
721--792
29
2.4
30
80
11
78
20
11
29
38
1.87
1257--1281
2
12.5
2
100
0
50
48
0
0
52
1.00
3722--3776
10
5.6
10
80
20
71
60
0
0
40
0.97
3699--3772
29
2.6
29
81
10
80
56
1
0
41
1.07
3728--3770
7
6.0
7
94
5
77
58
0
0
41
0.98
3698--3776
39
2.1
39
83
6
101
55
1
0
43
1.07
3880--3904
12
2.1
12
100
0
50
24
20
16
40
1.91

Tables:   1

The End!