Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010104.1 Corchorus olitorius cultivar O-4 contig10136, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18042

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1210--1256
18
2.6
18
77
12
53
40
6
8
44
1.60
1252--1438
98
1.9
102
81
13
235
41
7
9
41
1.66
4803--4835
15
2.2
15
100
0
66
87
6
0
6
0.65
5751--5781
3
10.7
3
93
6
55
64
0
0
35
0.94
9102--9187
33
2.6
33
85
7
104
17
34
33
13
1.89
9401--9425
2
12.5
2
100
0
50
52
0
0
48
1.00
9519--9582
27
2.4
27
100
0
128
23
10
31
34
1.89
10120--10164
1
45.0
1
86
0
63
0
0
6
93
0.35
10120--10164
16
3.0
15
90
9
74
0
0
6
93
0.35
13115--13144
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!