Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010105.1 Corchorus olitorius cultivar O-4 contig10137, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2356

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--539
138
3.8
139
91
2
862
28
20
16
33
1.95
695--1109
40
10.3
40
82
8
468
31
20
9
38
1.86
695--1566
80
11.4
79
76
13
574
30
19
10
38
1.86
1150--1256
41
2.7
39
82
4
142
28
19
12
40
1.87
1254--1411
40
4.2
40
77
12
188
32
18
10
37
1.85
1305--1443
32
4.1
32
78
13
152
30
20
11
38
1.88
1265--1562
72
4.0
72
89
4
427
30
19
11
38
1.87
1021--1562
112
4.9
111
73
13
387
31
19
10
38
1.86
1420--1567
40
3.7
40
93
1
262
30
17
12
39
1.86

Tables:   1

The End!