Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010133.1 Corchorus olitorius cultivar O-4 contig10165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5644

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1165--1208
23
2.0
23
86
4
63
9
15
9
65
1.45
1166--1213
23
2.2
22
81
7
53
10
16
8
64
1.48
5474--5564
10
10.1
10
69
25
62
31
28
0
39
1.57
5452--5572
35
3.5
35
97
1
226
31
28
0
40
1.57
5481--5572
17
5.3
17
71
23
84
32
29
0
38
1.58

Tables:   1

The End!