Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010148.1 Corchorus olitorius cultivar O-4 contig10180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10902

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--50
2
23.5
2
100
0
94
0
48
0
51
1.00
3476--3510
18
1.9
18
94
0
61
28
8
14
48
1.73
5705--5734
6
5.0
6
100
0
60
16
33
0
50
1.46
9173--9220
25
1.9
25
87
8
71
27
29
16
27
1.97
10252--10289
19
2.0
19
100
0
76
31
15
10
42
1.81

Tables:   1

The End!