Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010156.1 Corchorus olitorius cultivar O-4 contig10188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9722

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2041--2070
2
15.0
2
100
0
60
50
0
0
50
1.00
5150--5182
17
2.0
17
88
5
50
51
9
33
6
1.58
6729--6915
96
1.9
96
85
3
257
28
25
16
29
1.96
6727--7172
90
4.9
90
78
9
343
27
27
15
28
1.96
9301--9365
24
2.7
24
95
0
112
41
13
4
40
1.66

Tables:   1

The End!