Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010170.1 Corchorus olitorius cultivar O-4 contig10202, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4486

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3147
332
9.5
331
86
2
4050
32
15
15
36
1.90
3207--3316
25
4.2
25
79
13
94
30
12
20
36
1.90
3186--3310
56
2.2
56
87
2
171
31
12
20
35
1.91
3202--3311
56
2.0
56
90
0
175
30
12
20
35
1.90
3892--3931
20
2.0
20
100
0
80
40
15
5
40
1.68

Tables:   1

The End!