Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010179.1 Corchorus olitorius cultivar O-4 contig10211, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9400

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--64
13
4.6
13
75
14
56
1
22
0
76
0.88
587--635
21
2.3
20
80
10
53
42
12
12
32
1.79
1172--1344
80
2.1
81
96
1
321
46
11
8
33
1.69
1217--1273
23
2.5
23
82
0
60
49
8
8
33
1.65
1313--1356
20
2.1
21
88
12
65
50
11
6
31
1.65
1416--1596
86
2.1
86
92
4
303
48
8
11
32
1.68
3099--3144
11
4.0
12
77
8
51
56
4
0
39
1.19
8309--8394
9
9.6
9
71
14
70
40
12
37
9
1.76
8312--8393
18
4.6
18
92
0
137
39
13
37
9
1.78

Tables:   1

The End!