Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010194.1 Corchorus olitorius cultivar O-4 contig10226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10895

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
941--1021
35
2.5
31
84
9
92
44
14
11
29
1.80
4635--4977
170
2.0
170
99
0
677
27
25
20
26
1.99
8199--8517
126
2.6
125
89
3
491
30
19
13
37
1.89
10254--10314
6
10.2
6
89
0
68
59
0
37
3
1.14
10254--10314
18
3.4
18
88
0
86
59
0
37
3
1.14

Tables:   1

The End!