Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010195.1 Corchorus olitorius cultivar O-4 contig10227, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19792

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3225--3259
18
2.0
17
88
5
52
51
5
11
31
1.61
3930--3967
20
2.0
18
90
10
58
13
7
0
78
0.94
7540--7587
18
2.5
20
83
10
64
16
27
6
50
1.69
10476--10587
57
1.9
58
92
1
190
22
21
8
48
1.76
13733--13778
23
2.0
22
87
4
65
34
15
6
43
1.72
13700--13868
61
2.8
62
90
3
272
32
15
14
37
1.87
16594--16618
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!