Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010227.1 Corchorus olitorius cultivar O-4 contig10259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7570

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--57
18
1.9
18
94
0
61
28
8
11
51
1.67
1643--1781
75
1.9
75
85
0
197
26
8
23
41
1.83
5626--6090
179
2.6
178
82
4
535
35
16
14
33
1.89
6914--6959
19
2.3
21
77
11
51
63
4
0
32
1.14

Tables:   1

The End!