Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010250.1 Corchorus olitorius cultivar O-4 contig10282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8342

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1126--1159
15
2.2
16
94
5
61
52
5
0
41
1.25
1625--1674
24
2.1
24
81
7
57
40
14
6
40
1.70
3562--3592
16
1.9
16
93
0
53
35
9
0
54
1.33
4019--4044
7
3.7
7
100
0
52
57
0
0
42
0.98
3933--4839
199
4.5
200
86
3
1171
36
16
13
34
1.87
3933--4838
401
2.2
402
86
4
1227
36
16
13
34
1.88
4829--4859
2
15.5
2
93
0
53
51
0
3
45
1.17
5746--6112
201
1.9
194
84
4
500
32
17
15
33
1.92
7756--7830
21
3.6
21
92
3
116
26
26
17
29
1.97

Tables:   1

The End!