Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010274.1 Corchorus olitorius cultivar O-4 contig10306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16506

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1012--1105
45
2.2
43
84
7
120
40
19
5
35
1.74
5165--5204
20
2.0
20
90
0
62
42
2
12
42
1.56
5373--5439
21
3.2
21
79
8
73
52
13
7
26
1.67
6925--6954
1
30.0
1
100
0
60
0
0
0
100
0.00
11657--11718
29
2.1
29
100
0
124
11
20
16
51
1.74

Tables:   1

The End!