Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010281.1 Corchorus olitorius cultivar O-4 contig10313, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14203

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1174--1612
41
10.8
41
79
4
433
37
22
28
11
1.89
1175--1592
163
2.6
164
86
1
563
37
22
28
11
1.88
1175--1576
82
4.9
82
88
1
574
37
22
29
10
1.88
1649--2075
48
8.7
48
81
6
507
29
15
29
24
1.96
1600--2074
97
4.8
98
81
7
552
30
16
28
24
1.96
11729--11805
27
2.8
28
86
7
104
40
31
12
15
1.85
11893--11931
20
2.0
20
85
10
53
48
0
15
35
1.45
13519--13554
19
1.9
18
88
5
54
38
8
22
30
1.83

Tables:   1

The End!