Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010285.1 Corchorus olitorius cultivar O-4 contig10317, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6092

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2102--2174
24
3.0
24
75
16
62
31
5
12
50
1.62
2371--2534
82
2.0
82
90
0
256
32
23
17
26
1.96
2527--2848
161
2.0
161
88
1
484
37
18
12
31
1.88
3119--3212
49
1.9
49
91
0
152
19
19
28
32
1.96
3133--3229
49
2.0
49
81
4
115
22
17
31
27
1.97
4030--4115
3
28.7
3
100
0
172
67
0
0
32
0.91
5671--5878
103
2.0
103
98
0
398
40
6
8
44
1.60
5937--6017
39
2.0
40
88
2
119
49
9
4
35
1.58

Tables:   1

The End!