Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010315.1 Corchorus olitorius cultivar O-4 contig10347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2031

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--160
46
3.5
46
88
5
238
29
15
23
31
1.95
334--491
36
4.4
36
86
0
217
28
22
24
24
1.99
334--491
72
2.2
72
95
0
289
28
22
24
24
1.99
805--862
30
1.9
30
85
0
80
34
20
25
18
1.96
898--962
34
1.9
34
93
0
112
38
18
18
24
1.93
851--1000
78
1.9
78
90
2
239
34
19
19
27
1.96
1445--1642
25
7.6
25
67
12
112
29
30
17
22
1.97
1415--1498
39
2.2
39
86
0
114
30
29
15
23
1.95
1436--1653
53
4.1
53
92
1
366
31
29
16
22
1.96
1436--1654
105
2.1
106
94
0
386
31
29
16
22
1.96

Tables:   1

The End!