Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010331.1 Corchorus olitorius cultivar O-4 contig10363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11343

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1107--1157
22
2.2
24
83
16
72
41
0
0
58
0.98
1107--1155
25
2.0
25
84
8
64
40
0
0
59
0.98
1175--1692
258
2.0
254
89
4
797
32
19
15
32
1.93
1957--1984
14
2.0
14
100
0
56
57
7
14
21
1.61
2407--2492
41
2.1
41
100
0
172
37
8
9
45
1.66
4177--4205
2
15.0
2
92
7
51
51
0
0
48
1.00
5203--5231
5
5.8
5
100
0
58
58
0
0
41
0.98
7205--7260
26
2.1
28
86
6
80
58
0
17
23
1.38
7940--8192
124
2.0
124
88
6
371
37
11
1
49
1.50
7940--8192
132
2.0
124
90
6
398
37
11
1
49
1.50

Tables:   1

The End!