Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010337.1 Corchorus olitorius cultivar O-4 contig10369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14550

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1667--1741
33
2.3
33
97
0
141
53
1
2
42
1.23
1667--1741
11
6.8
11
78
0
87
53
1
2
42
1.23
3408--3448
20
2.0
20
85
0
55
19
29
24
26
1.98
3564--3601
18
2.1
19
90
5
60
47
7
15
28
1.74
3574--3608
18
1.9
18
88
0
52
42
11
17
28
1.83
5989--6028
2
20.0
2
90
10
64
47
0
2
50
1.14
10211--10546
178
1.9
179
93
0
575
24
24
15
36
1.93
13840--14009
24
7.0
24
93
2
277
21
21
31
24
1.98

Tables:   1

The End!