Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010344.1 Corchorus olitorius cultivar O-4 contig10376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2154

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222--259
11
3.5
11
85
10
51
57
2
0
39
1.12
924--958
16
2.2
16
100
0
70
34
5
20
40
1.76
1209--1258
15
3.5
15
75
25
63
50
0
2
48
1.12
1207--1265
30
2.0
30
93
0
100
50
0
3
45
1.18
1770--1850
39
2.0
40
92
2
137
50
8
3
37
1.51
1841--1887
25
1.9
24
95
4
85
29
6
8
55
1.55

Tables:   1

The End!