Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010362.1 Corchorus olitorius cultivar O-4 contig10394, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3059

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--329
123
2.0
123
93
1
422
22
17
18
41
1.91
207--637
154
2.8
154
93
0
711
21
19
19
40
1.91
523--761
124
1.9
123
94
0
424
22
17
17
42
1.89
361--1074
278
2.6
277
94
0
1212
21
18
18
41
1.91
796--1036
123
2.0
124
97
0
457
23
16
16
43
1.87
1014--1135
61
2.0
62
86
1
174
18
18
22
40
1.92
920--1505
216
2.7
215
92
1
978
20
18
19
40
1.91
1230--1351
61
2.0
62
85
1
165
17
19
23
39
1.92
1292--2086
154
5.2
154
92
1
1292
21
18
19
40
1.91
1971--2211
125
1.9
123
94
1
419
22
18
18
41
1.91
2087--3057
154
6.3
154
87
1
1446
20
19
19
40
1.91
1292--2979
893
1.9
894
91
1
2765
20
19
19
40
1.91

Tables:   1

The End!