Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010372.1 Corchorus olitorius cultivar O-4 contig10404, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6161

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1561--1597
2
18.5
2
100
0
74
48
0
0
51
1.00
2022--2052
13
2.3
14
94
5
55
45
6
12
35
1.68
3544--4327
35
22.3
35
74
6
566
19
21
18
40
1.91
4226--4338
31
3.5
31
77
11
109
18
19
20
41
1.90
4196--4338
67
2.2
66
84
3
180
19
18
20
41
1.91
4540--5387
30
28.4
30
88
2
1084
20
15
17
45
1.85
5811--5934
28
4.5
27
82
9
119
19
14
22
43
1.87

Tables:   1

The End!