Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010377.1 Corchorus olitorius cultivar O-4 contig10409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2870

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1645--1690
22
2.1
21
84
11
58
26
15
4
54
1.59
1840--1886
22
2.1
22
84
0
58
42
10
10
36
1.74
1959--2099
22
6.7
22
66
22
72
36
12
9
41
1.76
2222--2609
22
17.5
22
67
17
153
34
15
10
40
1.81
2616--2658
22
2.0
22
85
0
59
41
16
9
32
1.80

Tables:   1

The End!