Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010401.1 Corchorus olitorius cultivar O-4 contig10433, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3943

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--92
28
1.9
28
88
7
83
44
9
7
38
1.65
685--751
25
2.6
26
86
9
93
35
5
4
53
1.46
997--1060
2
30.0
2
82
17
76
46
7
0
45
1.32
987--1060
14
5.6
14
87
12
95
44
9
0
45
1.36
987--1060
21
3.8
20
88
11
102
44
9
0
45
1.36
997--1065
7
10.1
7
89
10
56
47
7
1
43
1.39
1172--1244
7
10.1
7
84
15
96
43
13
0
42
1.44
1172--1243
19
3.8
18
87
12
101
43
13
0
43
1.44

Tables:   1

The End!