Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010408.1 Corchorus olitorius cultivar O-4 contig10440, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18013

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
609--633
13
1.9
13
100
0
50
56
0
0
44
0.99
7359--7409
16
3.2
16
100
0
102
31
7
5
54
1.53
9145--9189
22
2.0
22
100
0
90
31
4
13
51
1.61
10216--10254
20
2.0
20
94
0
69
56
5
0
38
1.22
10290--10485
105
1.8
105
81
4
241
12
32
38
17
1.87
10607--10653
17
2.7
18
81
12
53
51
0
23
25
1.49
12490--12526
2
19.0
2
94
5
67
51
0
0
48
1.00
16563--16677
56
2.0
57
96
1
214
40
1
22
34
1.64

Tables:   1

The End!