Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010438.1 Corchorus olitorius cultivar O-4 contig10470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24088

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191--219
3
9.7
3
100
0
58
65
0
0
34
0.93
6851--6960
27
4.1
27
97
0
202
33
14
36
15
1.88
6845--6948
15
7.5
15
63
25
59
32
13
34
19
1.90
6976--7111
18
7.6
18
77
6
114
39
17
22
20
1.92
12507--12591
27
3.1
27
67
18
75
32
16
4
45
1.68
12493--12579
29
3.1
29
67
18
83
34
14
4
45
1.66
12493--12601
56
1.9
56
92
0
182
32
15
5
46
1.69
13391--13419
15
1.9
15
100
0
58
51
27
6
13
1.66

Tables:   1

The End!