Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010440.1 Corchorus olitorius cultivar O-4 contig10472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4749

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
226--524
22
13.6
21
68
9
118
36
16
11
35
1.84
291--413
44
2.8
44
80
7
133
33
16
13
36
1.88
360--549
66
2.9
63
77
10
177
38
17
8
35
1.81
498--559
22
2.8
23
72
13
58
35
19
4
40
1.73
4166--4497
78
4.3
77
82
6
345
18
17
28
35
1.94
4170--4497
155
2.1
154
79
7
353
18
17
27
35
1.94

Tables:   1

The End!