Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010453.1 Corchorus olitorius cultivar O-4 contig10485, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1985

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
419--908
37
13.2
37
76
2
435
24
18
13
43
1.86
379--910
74
7.2
74
88
3
759
24
18
13
43
1.86
379--911
149
3.6
149
86
4
756
24
18
13
42
1.87
1005--1204
54
3.6
54
86
7
274
26
15
22
36
1.93
1278--1355
33
2.4
33
89
4
113
43
16
6
33
1.74
1513--1567
7
7.9
7
97
0
101
58
25
0
16
1.38

Tables:   1

The End!