Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010506.1 Corchorus olitorius cultivar O-4 contig10538, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10457

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
406--444
19
2.1
19
95
0
69
33
15
12
38
1.85
482--595
56
2.0
56
91
0
183
33
23
1
41
1.65
661--741
42
1.9
42
94
0
144
29
7
14
48
1.71
3155--3284
23
5.5
23
70
17
95
20
25
7
46
1.77
3153--3293
48
2.9
48
94
0
246
21
24
9
45
1.80
3178--3261
25
3.4
25
69
12
84
21
23
10
44
1.84

Tables:   1

The End!