Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010516.1 Corchorus olitorius cultivar O-4 contig10548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3110

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
893--1426
39
13.8
38
75
11
351
25
18
17
38
1.93
893--1426
77
6.9
77
75
12
375
25
18
17
38
1.93
903--1231
116
2.8
114
82
10
368
25
17
17
39
1.92
910--1426
116
4.5
112
73
16
323
25
18
17
38
1.93
2166--2197
15
2.1
15
100
0
64
31
40
6
21
1.78
2514--2553
9
4.3
9
83
3
53
77
12
2
7
1.07
2520--2555
18
2.0
18
94
0
63
80
11
2
5
0.98
2514--2554
10
4.3
10
78
12
50
78
12
2
7
1.06

Tables:   1

The End!