Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010578.1 Corchorus olitorius cultivar O-4 contig10610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4742

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
488--561
26
2.8
27
77
4
78
40
22
14
21
1.90
958--1279
35
9.2
35
90
3
454
28
21
18
31
1.96
1461--1687
64
3.5
64
87
0
328
27
21
14
36
1.93
1675--1976
67
4.5
67
91
1
491
25
22
15
36
1.93
1675--1976
132
2.3
134
93
1
509
25
22
15
36
1.93

Tables:   1

The End!