Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010581.1 Corchorus olitorius cultivar O-4 contig10613, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7050

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
919--965
24
2.0
24
100
0
94
34
0
17
48
1.47
922--973
24
2.2
24
89
0
77
32
0
19
48
1.49
1745--1790
23
2.0
24
91
4
76
36
0
15
47
1.45
3339--3442
22
4.7
22
73
11
88
38
13
11
36
1.81
3250--3410
67
2.4
67
74
9
157
40
14
9
34
1.80

Tables:   1

The End!