Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010587.1 Corchorus olitorius cultivar O-4 contig10619, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4827

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
648--783
42
3.2
42
91
4
220
33
6
22
38
1.80
2399--2436
2
18.5
2
89
10
51
47
0
5
47
1.24
2833--3220
22
17.5
22
67
14
120
35
15
10
37
1.83
2833--2955
43
2.8
44
76
7
133
35
21
10
32
1.87
3182--4040
428
2.0
428
97
0
1610
38
8
13
39
1.75
3916--4171
129
2.0
129
97
0
485
46
4
7
41
1.50

Tables:   1

The End!