Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010599.1 Corchorus olitorius cultivar O-4 contig10631, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9070

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
313--368
18
3.1
18
69
7
51
66
3
0
30
1.09
1866--1924
16
3.8
15
81
16
75
6
13
35
44
1.71
2045--2075
13
2.3
14
94
5
55
61
0
0
38
0.96
6332--6402
21
3.4
21
94
3
117
28
18
26
26
1.98
6596--6725
65
2.0
65
95
0
233
22
26
30
20
1.98
7879--7919
21
2.0
21
85
9
57
34
9
26
29
1.88
8377--8405
15
1.9
15
100
0
58
51
27
6
13
1.66

Tables:   1

The End!