Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010610.1 Corchorus olitorius cultivar O-4 contig10642, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2666

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--509
42
2.0
43
88
6
131
36
3
8
51
1.49
1199--1245
25
1.9
24
95
4
85
55
8
6
29
1.55
1236--1320
45
1.9
44
90
7
136
36
2
8
52
1.44
1238--1334
45
2.1
46
83
9
119
37
3
9
50
1.50

Tables:   1

The End!