Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010622.1 Corchorus olitorius cultivar O-4 contig10654, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3005

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--142
33
4.3
32
81
6
135
42
21
8
27
1.81
49--174
65
1.9
66
88
4
193
42
23
8
24
1.82
34--163
33
4.0
32
80
6
138
43
22
8
25
1.81
1717--1763
26
1.9
24
87
12
69
40
4
27
27
1.75
2632--2693
21
3.0
21
95
0
106
24
27
19
29
1.98

Tables:   1

The End!