Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010654.1 Corchorus olitorius cultivar O-4 contig10686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7221

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1949--2129
4
46.5
4
65
21
57
65
0
8
25
1.24
1949--2111
19
8.9
19
68
21
91
66
0
8
24
1.24
1951--2154
46
4.5
44
84
6
214
65
0
9
24
1.25
2005--2131
25
5.5
24
68
21
92
64
0
9
25
1.23
1999--2154
46
3.5
46
91
2
219
64
0
10
25
1.24
2072--2151
25
3.4
25
71
13
87
65
0
11
23
1.25
4290--4495
75
2.8
75
77
3
200
41
16
24
17
1.89
4527--4558
2
15.5
2
93
6
55
46
0
3
50
1.17
5203--6160
435
2.2
438
88
3
1417
42
17
13
25
1.87

Tables:   1

The End!