Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010669.1 Corchorus olitorius cultivar O-4 contig10701, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3682

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--324
35
9.1
35
79
9
237
42
16
21
18
1.88
1--324
36
9.2
35
80
6
277
43
16
21
18
1.88
30--324
71
4.1
72
81
3
310
43
16
21
18
1.88
446--558
21
5.4
21
90
2
133
28
21
24
25
1.99
459--558
42
2.4
42
93
0
164
27
21
26
26
1.99
1417--1463
26
1.9
24
87
12
69
27
27
4
40
1.75
3470--3544
21
3.6
21
90
0
114
26
20
26
26
1.99

Tables:   1

The End!