Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010678.1 Corchorus olitorius cultivar O-4 contig10710, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3308

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2272--2316
21
2.2
20
88
4
63
44
13
11
31
1.78
2219--2302
40
2.1
40
80
12
93
47
14
9
28
1.75
2473--2575
21
4.9
21
72
13
68
53
8
9
28
1.63
2501--2668
21
8.0
21
71
16
75
48
8
10
32
1.67
2600--2678
21
3.7
20
77
12
68
44
10
10
35
1.72
2801--2842
22
2.0
21
86
9
59
38
7
21
33
1.81
2929--2979
24
2.1
24
85
7
68
58
11
5
23
1.55
2955--2998
20
2.1
21
88
12
65
50
11
6
31
1.65

Tables:   1

The End!