Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010684.1 Corchorus olitorius cultivar O-4 contig10716, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16820

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
900--1318
205
2.1
201
89
2
633
44
7
10
37
1.67
1395--1475
39
2.0
40
92
2
137
37
3
8
50
1.51
2033--2102
36
1.9
36
91
0
113
21
10
8
60
1.55
2590--3000
203
2.0
203
94
0
725
43
8
11
36
1.71
3109--3189
39
2.0
40
90
2
128
38
3
7
50
1.48
3110--3174
18
3.4
18
66
25
53
36
3
9
50
1.50
3406--3451
6
7.8
6
90
4
76
50
0
13
36
1.41
4305--4339
4
8.8
4
87
0
52
51
5
0
42
1.25
6127--6166
18
2.2
18
86
0
53
25
5
52
17
1.64
10055--10095
20
2.0
20
95
0
73
41
12
17
29
1.85
10845--10874
15
2.0
15
100
0
60
33
6
40
20
1.78
11471--11637
81
2.1
81
96
0
307
46
19
5
28
1.73

Tables:   1

The End!