Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010700.1 Corchorus olitorius cultivar O-4 contig10732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13047

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389--441
26
2.0
26
85
3
70
39
24
16
18
1.91
3027--3063
18
2.0
19
94
5
67
10
13
10
64
1.49
4571--4647
18
4.4
17
75
16
61
67
1
6
24
1.22
4562--4644
29
3.0
28
73
18
75
67
1
6
25
1.21
4639--4684
24
1.9
24
86
0
65
54
0
21
23
1.45
4704--4773
19
4.1
18
69
25
62
64
1
8
25
1.30
4714--4774
31
2.0
31
83
6
79
67
1
6
24
1.24
6567--6758
64
3.0
64
99
0
375
41
17
14
26
1.87
12069--12100
10
3.2
10
90
0
55
9
50
28
12
1.71
12369--12395
9
3.0
9
100
0
54
0
0
11
88
0.50
12953--13046
3
31.3
3
100
0
188
67
0
0
32
0.91

Tables:   1

The End!