Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010705.1 Corchorus olitorius cultivar O-4 contig10737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35590

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1411--1442
16
2.0
16
100
0
64
31
18
6
43
1.75
8231--8284
27
2.0
27
81
0
63
7
24
11
57
1.58
9945--10249
102
3.0
101
96
1
549
33
22
14
28
1.94
14014--14245
116
2.0
116
100
0
464
32
30
4
32
1.77
14358--14403
24
2.0
24
86
4
67
10
19
17
52
1.74
16051--16214
82
2.0
82
96
0
301
25
23
7
43
1.81
19640--19701
29
2.2
28
82
8
81
61
4
1
32
1.27
21220--21734
260
2.0
260
99
0
1021
36
14
14
33
1.87
28552--28604
21
2.5
22
75
6
63
32
7
13
47
1.70
33951--33996
21
2.2
21
88
0
65
17
34
23
23
1.96

Tables:   1

The End!