Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010740.1 Corchorus olitorius cultivar O-4 contig10772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10349

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
369--437
33
2.1
33
91
0
111
15
28
5
49
1.68
1376--1414
12
3.2
12
85
0
51
10
17
48
23
1.78
1376--1414
18
2.2
18
85
0
51
10
17
48
23
1.78
1826--1882
25
2.2
25
81
9
71
19
15
7
57
1.60
3739--3784
15
3.1
15
75
12
58
34
28
19
17
1.94
7049--7083
14
2.5
14
100
0
70
28
5
31
34
1.81
7562--7660
31
3.3
31
78
5
121
33
12
21
33
1.90
9343--9380
19
2.0
19
90
10
60
71
0
2
26
1.00
10308--10349
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!