Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010741.1 Corchorus olitorius cultivar O-4 contig10773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52196

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
610--653
11
4.1
11
85
2
54
0
2
11
86
0.66
611--650
14
2.6
16
92
7
66
0
2
10
87
0.63
13552--13581
15
2.0
15
93
0
51
76
0
0
23
0.78
20635--20663
7
4.1
7
100
0
58
17
41
0
41
1.49
35637--35669
11
3.0
11
91
8
50
0
15
0
84
0.61
36829--36884
28
2.0
28
100
0
112
21
17
0
60
1.36
38031--38063
2
16.5
2
100
0
66
48
0
0
51
1.00
39503--39528
2
13.0
2
100
0
52
50
0
0
50
1.00
43605--43635
2
15.5
2
100
0
62
48
0
0
51
1.00
44209--44277
30
2.3
30
94
0
120
15
42
2
39
1.63
45288--45341
19
2.6
21
77
19
60
38
3
18
38
1.69
49241--49286
23
2.0
23
95
0
83
26
10
17
45
1.81

Tables:   1

The End!