Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010771.1 Corchorus olitorius cultivar O-4 contig10803, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36783

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3835--3868
17
2.1
16
88
5
50
20
0
52
26
1.46
5424--5492
27
2.6
27
85
0
84
33
26
18
21
1.97
7892--7944
9
5.7
10
75
22
53
79
1
0
18
0.83
11246--11395
50
3.0
50
80
3
169
34
14
16
34
1.90
14526--14567
21
2.0
22
85
4
59
35
14
28
21
1.92
20629--20731
52
1.9
54
88
7
156
33
21
21
24
1.97
20726--21054
43
7.8
42
84
8
434
22
10
25
41
1.85
20726--21054
84
3.9
84
91
3
536
22
10
25
41
1.85
21913--21946
16
2.1
16
88
5
50
55
5
0
38
1.24
24371--24411
19
2.2
19
86
4
57
4
12
9
73
1.24
27712--27783
27
2.7
27
88
0
108
41
27
13
16
1.87
31808--31836
2
14.5
2
100
0
58
51
0
0
48
1.00
34332--34366
2
18.5
2
88
11
56
51
0
0
48
1.00

Tables:   1

The End!